Identifiers and Description
Gene Model Identifier
SteCoe_5081Standard Name
NoneAliases
NoneDescription
RNA_pol_Rpb1_1 domain proteinGenome Browser
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Gene Ontology Annotations
Molecular Function
- DNA binding (IEA) | GO:0003677
- DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899
Biological Process
- transcription, DNA-templated (IEA) | GO:0006351
Domains
- ( PF04997.10 ) RNA_pol_Rpb1_1
- ( PF00623.18 ) RNA_pol_Rpb1_2
- ( PF04983.16 ) RNA_pol_Rpb1_3
- ( PF05000.15 ) RNA_pol_Rpb1_4
- ( PF04998.15 ) RNA_pol_Rpb1_5
- ( PF04992.12 ) RNA_pol_Rpb1_6
- ( PF04990.10 ) RNA_pol_Rpb1_7
Gene Expression Profile
No expression data available at this time.
Homologs
Source Identifier Score Description Oxytricha Trifallax Contig18775.0.g49 0 RNA polymerase Rpb1, domain 5
WormBase WBGene00000123 0
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>SteCoe_5081(Protein)
MLKSGSAFTPSIAEVHKVTGVSFGILRPDEIEAMSADTITHTDIYDDEGKPKDQGVNSLL
MGTNDNLLQCKTCNGRKNDCPGHFGHIKLAKPVYHFGFLNEIRRVLRSVCFNCSRLLLSH
SDPRFQTAVKIKNPKARGKQLYKICEGIKKCPTAQGEKEADEDNEEGNFGGCGKIQPKII
RDGIGLVVEYNEAVDDQPDRKRRLNAEDALKILKGVSDVDCEALGFDPARSRPDWMIVQV
LPVAPPCVRPYVVLDSTLRSEDDLTHQYTQILKTNNKLANEIERGSPQHLINQDIMVLQF
HVATLFNNEIPGQPQAKHRSGKPIKSISQRLKGKEGRIRGNLMGKRVDFSARTVITPDPN
LSLDQLGVPRSIALNLTIPETVTHFNMEKMKILVDNGPAMHPGAKYIIRSDGSIIDLKYV
RRHTELHLEYGYKVERHITNGDFVIFNRQPSLHKMSMMAHSVVILPYSTFRLNLSVTTPY
NADFDGDEMNMHVPQSLETKAELTEIMHVPKQIVSPQSNRPVMGVVQDSLLGVSLFTRRD
MFLELHEVMNLLMWIDNFNGRLPVPCVLKPRPLWTGKQIFSLLLPEVNLTRYSSTHDGDK
DSSSRDTEVLIEKGELLTGIVDKRTVGSSSGSLIHVIWMEHGPMHTKDFLSRCQKVVNNW
LLMHSFSVGISDTITESSSIDNIRQTLSTAKGKIIKLINQAREGKIPCQPGKNMMESFEF
KVNTKLNAARDKSGELATKSLSFRNRVKAMVNAGSKGSEINICQIMACVGQQNVEGRRIP
FTFMKRTIPHFGKDDYGPESRGFVENSYISGLTPQEFFFHAMGGREGLSDTAVKTSETGY
IQRRLMKALEDVMVKYDGTVRNSAGNILQFLYGEDGMAGEYIEDQVLETLKLDYESLKKN
YEFLDPNEDPEICLDKYRGAIESYVISEIVRRPDQQVRLMQEFKKIVEDQKELRVIFTNY
DDRQHLPVNLKRLIWNAKKKFGISGLNRSDLHPVKVIDSLEGLGKKLKVISGFNKSEYEN
DNNATMLFNIHLRSLLSSKRTIVKERLTEEAFEWLLGEIESRFSQAKTQPGEMVGSIAAQ
SLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINVAKNIKTPSLNVYLQNDFASSSDY
AKEILSKLEYTTLGNVTEACEIYYDPDPVRTIIEEDAELVENYFEMPDEGIEIDKMSPWL
LRIELNKIAMIDKNITMHDIHDKITQEYPNELHCIYSDDNDEKLILRLRIMNDEENTVQD
EQLSKWKFLKDLEGAMLQDLWLKGIEGISKVVMKEVNVCSIGSDGGIRRNKHWRLETDGV
NLRAVLALEGIDHTKTISNDLIEVANILGIEAVRQALMKELREVLNVYGIYVNYRHLSIL
CDVITQRGYLMSITRHGINRTECGPLHKASFEETVEMLLEASAYSEVDFLKGVTESIMLG
QLAPIGTGEIDVLIDAEKIEHAQTIYDPLEVPEMLDYPTNKYPAEGAQGTPINVATPRVI
MPDSTAATTPRAETPGNNANFSPWEYAPSPASHASPFVRYSPVIHSPMYAHTPSMVQSPN
YAGSIPSYSPSNNSMRPFSPYGITSPTVAVAISPKMQNYPSPYYSPSHPGYSPSSPAYSP
TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTNAYSPNVPSPAYKPTPYVPSPVYN
PRSPAYNSASPKIAQQVIVSKTETIEEDEDDEEEVSN>SteCoe_5081(CDS)
ATGCTAAAATCTGGTAGTGCGTTTACACCTTCAATAGCCGAAGTCCATAAAGTGACTGGG
GTAAGTTTTGGAATCCTCCGTCCAGATGAAATTGAAGCTATGTCTGCTGATACAATAACC
CATACAGACATTTATGATGATGAAGGAAAGCCTAAAGACCAAGGCGTAAATAGTCTTTTA
ATGGGAACAAATGACAATTTGTTACAATGTAAAACTTGTAATGGGCGGAAGAATGACTGC
CCAGGACATTTTGGCCATATCAAACTTGCTAAACCAGTGTATCATTTCGGCTTCCTTAAT
GAAATCAGACGGGTATTACGATCTGTATGTTTCAATTGTTCAAGACTTCTTCTTAGCCAT
AGTGATCCACGTTTCCAAACAGCTGTAAAAATCAAAAACCCTAAAGCTCGAGGTAAACAA
TTATATAAAATATGTGAAGGGATAAAAAAATGCCCAACAGCTCAAGGAGAAAAAGAAGCA
GACGAAGATAACGAAGAAGGGAATTTTGGTGGATGTGGCAAAATCCAACCAAAAATCATA
AGAGATGGTATAGGATTAGTTGTAGAATATAATGAAGCTGTTGATGATCAGCCTGATAGA
AAAAGACGTTTGAATGCTGAAGATGCTTTGAAAATATTAAAAGGGGTTTCTGATGTTGAT
TGTGAAGCTTTAGGATTTGATCCTGCCCGCTCGCGACCAGACTGGATGATTGTCCAAGTG
CTTCCAGTTGCCCCTCCTTGTGTCCGTCCATATGTGGTTTTAGATTCAACATTGCGTAGT
GAGGATGATTTAACCCATCAATATACTCAGATATTAAAAACTAATAACAAATTAGCAAAT
GAAATTGAAAGAGGATCACCACAGCATCTTATAAATCAAGACATTATGGTCTTACAATTC
CATGTAGCTACACTTTTTAATAATGAAATCCCAGGACAACCTCAAGCTAAACATAGATCA
GGAAAACCAATAAAAAGTATCAGTCAAAGGCTTAAAGGTAAAGAAGGGAGGATTAGAGGA
AATCTTATGGGAAAAAGAGTTGATTTTTCTGCTAGAACTGTGATTACCCCAGATCCTAAT
TTAAGCTTAGATCAATTAGGTGTCCCTAGATCCATAGCACTTAATCTAACTATTCCAGAA
ACAGTCACACATTTTAATATGGAAAAGATGAAAATTCTTGTTGATAATGGACCAGCTATG
CACCCTGGAGCTAAATATATAATCCGTTCTGATGGGAGTATAATTGACTTAAAATATGTT
AGAAGACATACAGAGCTTCATTTAGAATATGGGTATAAAGTTGAAAGACATATCACAAAT
GGAGATTTCGTTATTTTTAACAGACAACCTTCTTTACATAAAATGTCGATGATGGCCCAT
TCTGTTGTAATTTTGCCTTATTCGACTTTTAGATTGAATTTATCAGTGACAACACCTTAT
AATGCTGATTTTGATGGAGATGAAATGAATATGCATGTTCCACAAAGCTTAGAAACTAAA
GCTGAACTTACAGAAATAATGCATGTGCCTAAACAGATTGTCTCGCCACAAAGTAATAGA
CCTGTTATGGGTGTTGTTCAGGATTCATTACTTGGGGTATCATTGTTTACTAGAAGGGAT
ATGTTTTTAGAGCTTCATGAGGTTATGAATTTGCTTATGTGGATTGATAATTTTAATGGA
AGGTTACCAGTTCCTTGTGTATTAAAGCCAAGACCTTTATGGACTGGGAAACAGATTTTT
TCGCTTTTGTTGCCGGAGGTTAATTTGACAAGATACTCATCAACTCATGATGGGGATAAG
GATTCTTCAAGTAGAGATACGGAGGTTTTGATTGAAAAAGGAGAACTATTGACTGGGATT
GTGGATAAAAGAACTGTTGGGTCATCTTCTGGCTCACTTATACATGTTATATGGATGGAA
CATGGTCCTATGCATACTAAAGACTTCTTATCTCGCTGCCAAAAAGTTGTCAACAACTGG
CTTCTTATGCATTCTTTTAGTGTTGGGATCAGTGATACCATAACTGAGTCATCATCAATT
GACAACATCAGACAAACTCTTTCAACAGCCAAAGGGAAAATCATCAAACTTATAAACCAA
GCACGTGAAGGCAAAATCCCATGTCAACCAGGTAAAAATATGATGGAAAGCTTTGAGTTC
AAAGTTAACACAAAACTCAATGCTGCTCGTGATAAATCAGGTGAATTAGCAACAAAAAGT
TTAAGTTTCAGAAATCGTGTCAAAGCTATGGTAAATGCAGGGTCAAAAGGTTCTGAAATA
AACATCTGTCAAATCATGGCTTGTGTAGGTCAACAAAATGTTGAAGGTCGAAGAATTCCA
TTTACTTTTATGAAAAGGACAATCCCACATTTTGGTAAAGACGACTATGGTCCTGAATCA
AGAGGTTTTGTAGAAAATTCTTATATATCAGGTTTAACACCACAAGAGTTTTTTTTTCAT
GCTATGGGTGGTAGAGAAGGTTTAAGTGATACAGCTGTAAAAACTAGTGAAACTGGGTAT
ATACAAAGACGTCTTATGAAAGCATTAGAGGATGTTATGGTAAAATATGATGGGACAGTT
AGAAACTCTGCAGGAAACATTTTACAGTTTTTATATGGAGAAGATGGTATGGCAGGAGAA
TATATCGAAGATCAGGTTTTAGAAACTTTGAAACTGGATTATGAAAGTTTAAAGAAAAAT
TATGAATTTCTTGACCCTAATGAAGACCCTGAGATATGTTTAGATAAATATAGAGGGGCT
ATAGAAAGTTATGTTATAAGTGAAATTGTTAGAAGACCAGATCAGCAGGTAAGATTGATG
CAAGAGTTTAAGAAAATTGTTGAGGACCAAAAAGAACTCAGGGTTATTTTTACTAATTAT
GACGATAGGCAGCATTTACCTGTAAATCTTAAAAGGCTTATTTGGAATGCAAAGAAAAAA
TTCGGGATTTCTGGACTGAACCGAAGCGACTTGCACCCTGTAAAAGTTATTGACAGCCTA
GAAGGTTTAGGAAAAAAACTTAAAGTTATATCTGGGTTTAATAAAAGTGAATATGAAAAC
GACAATAATGCAACAATGCTTTTTAATATCCATTTACGGAGTTTATTAAGTTCAAAAAGA
ACTATAGTCAAAGAACGACTGACTGAAGAAGCTTTTGAATGGTTACTTGGGGAAATAGAA
TCAAGGTTTTCACAAGCAAAAACTCAACCTGGAGAAATGGTTGGTTCTATAGCCGCTCAA
TCTTTAGGTGAACCTGCAACTCAGATGACTTTAAATACTTTTCACTTTGCAGGAGTTTCA
TCAAAAAACGTAACTTTAGGTGTCCCAAGATTAAAAGAAATAATCAATGTGGCTAAAAAC
ATAAAAACTCCATCATTAAATGTTTATTTACAAAACGATTTTGCTTCAAGTTCTGATTAT
GCTAAAGAAATACTAAGTAAACTTGAATATACAACCTTAGGCAATGTAACTGAAGCTTGT
GAAATTTATTATGACCCTGACCCTGTGCGGACTATAATAGAAGAAGATGCTGAACTTGTT
GAAAATTATTTTGAAATGCCAGATGAAGGTATTGAAATAGATAAAATGTCCCCATGGTTG
TTACGTATTGAATTAAATAAAATTGCTATGATTGATAAGAATATTACAATGCATGATATA
CATGATAAAATAACTCAAGAATATCCAAATGAACTTCATTGTATATATTCTGATGATAAT
GATGAGAAACTTATATTAAGACTTAGAATTATGAATGATGAAGAAAATACAGTACAAGAT
GAACAGCTTTCTAAATGGAAATTCTTAAAAGATCTTGAAGGAGCGATGTTACAGGATTTA
TGGCTTAAAGGGATTGAAGGGATATCTAAAGTTGTTATGAAAGAAGTTAATGTATGTAGT
ATAGGTTCAGATGGGGGGATAAGAAGGAATAAGCATTGGAGACTTGAAACTGATGGGGTA
AATCTGCGAGCTGTACTTGCACTTGAAGGTATTGATCATACAAAAACGATTTCTAATGAT
CTGATTGAAGTTGCTAATATATTAGGTATTGAAGCAGTAAGACAAGCATTAATGAAAGAA
CTTCGTGAAGTATTAAATGTATATGGGATTTATGTGAATTATAGGCATTTATCAATATTA
TGTGATGTTATAACACAAAGAGGGTATTTGATGAGTATAACACGTCATGGGATAAACAGG
ACAGAATGTGGACCTTTACATAAAGCATCATTTGAAGAAACTGTAGAAATGCTTTTAGAA
GCCTCAGCGTATTCTGAAGTGGATTTTTTAAAAGGAGTCACAGAAAGTATTATGCTTGGT
CAATTAGCTCCGATAGGCACAGGAGAAATTGATGTGTTGATTGATGCTGAAAAAATCGAG
CATGCACAAACTATATATGACCCACTTGAAGTACCAGAAATGCTTGACTACCCAACGAAT
AAATATCCAGCAGAAGGTGCTCAAGGGACTCCAATTAATGTAGCAACACCTAGGGTAATA
ATGCCAGATAGTACTGCGGCAACTACACCAAGGGCAGAAACTCCAGGGAATAATGCGAAT
TTTTCTCCTTGGGAATATGCTCCAAGTCCTGCTAGTCATGCATCTCCTTTTGTCAGATAC
TCACCTGTTATTCATTCACCAATGTATGCTCATACACCTAGTATGGTTCAAAGCCCTAAT
TATGCTGGTTCAATACCTAGTTACTCTCCTTCAAATAATAGCATGAGACCTTTTAGTCCA
TATGGTATCACTAGTCCTACTGTTGCTGTTGCCATAAGCCCTAAAATGCAAAATTACCCT
AGTCCTTATTATTCACCTTCACATCCTGGGTATTCACCTTCATCACCTGCTTATTCACCT
ACATCACCAGCTTATTCACCTACATCACCGGCTTATTCTCCTACATCACCAGCTTATTCA
CCTACATCACCTGCTTATTCACCTACATCACCTGCTTATTCTCCTACAAATGCTTATTCA
CCAAATGTTCCATCACCTGCTTATAAACCTACACCTTATGTACCTAGTCCTGTTTATAAT
CCTAGAAGTCCAGCTTATAATTCTGCATCACCTAAAATTGCCCAACAAGTTATTGTTTCT
AAGACTGAAACTATTGAAGAAGATGAGGATGATGAAGAAGAAGTTAGTAACTAG