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Recent Papers

McGillivary RM, Sood P, Hammar K, Marshall WF (2023) The nuclear transport factor CSE1 drives macronuclear volume increase and macronuclear node coalescence in . iScience 26:107318
PUBMED:37520736

Sun X, Zhang H, Wang Z, Huang T, Tian W, Huang H (2023) Responses of Zooplankton Community Pattern to Environmental Factors along the Salinity Gradient in a Seagoing River in Tianjin, China. Microorganisms 11:
PUBMED:37512811

Gonzalez-Recio O, Scrobota N, López-Paredes J, Saborío-Montero A, Fernández A, López de Maturana E, Villanueva B, Goiri I, Atxaerandio R, García-Rodríguez A (2023) Review: Diving into the cow hologenome to reduce methane emissions and increase sustainability. Animal : an international journal of animal bioscience :100780
PUBMED:37032282

BLAST Server at StentorDB

Click here for information about the BLAST process and help with advanced options.

BLAST Program

blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database

Database

Stentor coeruleus (protein)
Stentor coeruleus CDS (nucleotide)
Stentor coeruleus Assembly (nucleotide)
Chlorella (protein)
Chlorella (nucleotide)
Stentor pyriformis (protein)
Stentor pyriformis CDS (nucleotide)
Stentor pyriformis Assembly (nucleotide)

Query Sequence Enter sequence below in FASTA format

Or load it from disk:
Set subsequence from to

Advanced Options

Filter for low copmlexity regions

Perform ungapped alignment

Expect
Matrix
Alignments

Query Genetic Codes (blastx only)
Database Genetic Codes (tblast[nx] only)

Other advanced options:

Wiki Links

External Links

Ciliate Genomics Consortium

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The Ciliate.org project at Bradley University is supported by a grant from the National Center for Research Resources, part of the US National Institutes of Health.